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GT22127

CSHL Arabidopsis genetrap mutant lines

Original: GT22127

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22127

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6428781 [Map]; Strand: c
      • AT5G19150.2 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: -327; Region: promoter
      • AT5G19150.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: -314; Region: promoter
      • AT5G19151.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT22127 - 5-prime edge 
    CCCAAGTCAA ATAGATAATC CATCAATCGC TCACAGCATA AATCTATCTC 
    TTCTGAAATG AAACAGAAGC AGAACAATTA AGAGCAAGCG ATTGAGAGAG 
    AGAGAGATAA CACAAGACCT TGTTGTTGAT GTTGTTGAGA AGACTGAAGA 
    GATCTTTCGT ATTGTTCAGC CTTTTCAAGG AAAGGCTTGT AACCAAGCTC 
    CAGTGACAAG TAACCAAAGG CCAATGATCC CAACACCACC ACCGATGATC 
    GAATCGCGTT GTCCATCACC GTCCGCTTCA TCTTCTTCAT CTCTCTCGAC 
    CAAATCCGAC TCTGAAAAAG TTTGCTTTTT TTTCCTCTTT CCTATAAAAT 
    AATTAAATAA AAACGAAACC TTCTTAACCA AACAGAGAGT TCACTTCTCG 
    GTGCTGTATC GGAAGCGGTG GCTTTCTCGG CCCTCAACGA GAGAATCTGA 
    TGTTGGAGAA GCCCATTATC ATCTCTGGCT TGG

AT5G19150.1

Model type
Protein coding
Short Description
pfkB-like carbohydrate kinase family protein
Computational Description
pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G19150.2

Model type
Protein coding
Short Description
pfkB-like carbohydrate kinase family protein
Computational Description
pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G19151.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR