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GT22144

CSHL Arabidopsis genetrap mutant lines

Original: GT22144

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22144

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8522351 [Map]; Strand: w
      • AT5G24810.1 - [+] show detail - ABC1 family protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G24810.2 - [+] show detail - ABC1 family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT22144 - 5-prime edge 
    CGTCTTCTAT AAATGTTTCC CAAACCCATC GATACAAATT TATGAAAGAA 
    TCTCTTGATA ATTTCTGATA GTCTAACGAA AAACGATAAG AGAGAATCCA 
    ACACTAGTGA CCACCACCGT TTATTCTACA ATAATCAAAT CAAAAAGAGA 
    GATTTTTTTT TCAGTTCTTC AATTTCTGGA ATCAAAAGAA CCCAGATCGT 
    AGGGAAAGTA CAAATTCAAG ATTAAGGAAA AAAGCTTAAG ATTAAGAGGA 
    CCCAGATCGT CAAAATCAGA TTTTTGGAAG CAAAAATTTC ACCTGGAAAG 
    AGCCAGAATT GATTCCACGA AATCGCGAAT TCCGCATATA TAAAATTAAG 
    TGGTGGGATT AGAATATTCT ACGTTTGAAT TAGCTTTCTA GGAAAAGTTC 
    GCAGCTTTCG GGTAGGTGAG AGAGCTTAAC GTAAGAATTA GAAAGACAAA 
    GACGAAGACG AAGACAAAGA TCTACGGAGA AAAAACGCGT CATGCGTTTT 
    TGCGATGAAA CGAAAAGTAA AACCCCCGCG AAGCAAATGA TTCTATACCG 
    CAGATTCCTA TGGGACCCAC ACATCTCTTT TTCTGATTCT GTTGGGCTTT 
    TTATTTTACG CGTTATGGGC CCAATAAGCC CAAGTTAGTG TGATCGTCAA 
    TGGGCCACGT CATCTAATAT ATGCTTGTCA CGGTAGATGC GTTTAGTAAC 
    CAACCCACCT GCATATATAA ACCACACATG CCACATGTAG AAATAACAAA 
    AACATATACT ACTATAACTA AATTATTTAA AAATTATAGT

AT5G24810.1

Model type
Protein coding
Short Description
ABC1 family protein
Computational Description
ABC1 family protein; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Beta-lactamase-type transpeptidase fold (InterPro:IPR012338), Beta-lactamase-related (InterPro:IPR001466), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G24810.2

Model type
Protein coding
Short Description
ABC1 family protein
Computational Description
ABC1 family protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Beta-lactamase-type transpeptidase fold (InterPro:IPR012338), Beta-lactamase-related (InterPro:IPR001466), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2).
Link
InterPro Scan - TAIR