1. Home
  2. Mutant Lines
  3. GT22145

GT22145

CSHL Arabidopsis genetrap mutant lines

Original: GT22145

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22145

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22767974 [Map]; Strand: w
      • AT3G61510.1 - [+] show detail - ACC synthase 1
        Distance: -2244; Region: intergenic
      • AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 943; Region: intergenic
    Flanking Genome Sequence: GT22145 - 5-prime edge 
    ATCATCCTTT GTAATCCGTC CAATTCGCCT AAGTCGCAGG CTCGTCTTTA 
    ATAGAAAGAT TCTTCTTCCT TCCCTAGAGG TCCCATTTTC GTACTTGTGT 
    GATTCGTGCA TCAACAACAG TGACTGTGAT ATTAATTACA CCAACTTCCT 
    TTTATCTTGT TTTAGTCTTT AAAAATATTG ATCCTTATTC CTTCGTAAAT 
    GCATGTGATG CTTTTGGCAT TAAATCGTGA CTAACAATAT GACCAATGAT 
    CGGAACCAAT GATCGGAACC AAAGCTAGAG GTTCAGCTTC CAAAGTTGTC 
    AGTTTAAGTA AATGCATGTG ATGTTTTTCT TTGTCAAATT GGTTGTAAGT 
    TGTAGATTGT AACATAAAAT CAATTCTTAT TTGACGCATG ATACAAAACC 
    TAAATGGCGC TTGAAAATTC TGACGGTTAA CTGTAACAAA AGCTCAAGAG 
    GTGAAAGAGA ATCTGTATTC TTAATTTCCA TATCCATATT GTATAAGATT 
    CGAGAAGAAT ATTTTAGTTC TACGTAGAAA ATATACAAAT GTTCCTCAAA 
    ACATAATAAA ATGTGCGCAC GTAATAAGTC GGAACAATAG GGCGAAAAAG 
    GTGTACATTT GATAAATCGT GATTTATACA CTAATGAAAT TTAAGTGCGA 
    AGATCTAACG GTCCTGACCC CTAGGGTTAG GGGAGTTATA ATGATTAGTC 
    AACAATTAAA ACAAAACTAA TCAACTCGTT GGACAAATGG CAGCTTTGAC 
    TTCCGCTTCT TTAGTTGTCT GAAAAAA

AT3G61510.1

Model type
Protein coding
Short Description
ACC synthase 1
Curator Summary
Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity.
Computational Description
ACC synthase 1 (ACS1); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 2 (TAIR:AT1G01480.1); Has 22999 Blast hits to 22998 proteins in 2818 species: Archae - 808; Bacteria - 15898; Metazoa - 560; Fungi - 631; Plants - 1241; Viruses - 0; Other Eukaryotes - 3861 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61520.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink).
Link
InterPro Scan - TAIR