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Mutant Lines
GT22176

GT22176

CSHL Arabidopsis genetrap mutant lines

Original: GT22176

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22176

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 369933 [Map]; Strand: c
- AT5G01950.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
  Distance: 0; Region: exon1 (5UTR)
- AT5G01960.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -467; Region: promoter

GGAGCAGGTA GGTAGAGTCA ACCCAGTTCC GAATTATGAC CACGGAAGAA 
GGTTTAAGCT TTTTAAAATG GCAGACAAGT CAAGATCAAA CCTAGCAAAC 
ACCCATCAAG GTCATTTCTT CCCCCCTTTT CTCTCTCGAA TAATTGCATC 
ATTTTCCCGA TGTTTTGATT TGATCTGCAT TGCCGTCTGC ATATTTTGAC 
TTCTCTCGCC CGTTTCAGGG ATTTTGCCAT CCCAGAAGCT TTCTCTTATC 
CGCTTGCCTT TTTGGAAAAT TCTCTTAGGG AACTAGTACT AGTATTGCTG 
ATCTCAATAG TGAGGTAATG ATCTTGTCTT TGAGCTATTG AATTGCGTGG 
GGTTGAATTT TAGACCTGCT GTGTCTATTT CTGTCTTAAA TACAAGCTCC 
TTGTGCTCTT GGATATTTGG TCTCAGTCTA TATTTATCTG CTTCTTACGC 
TGTTACGCTT TCCAAAGGCA CCATGGTGTT CCCTCAAAGA CTCTATCTAC 
ATGCGCTCCT TGTTGCCTGT TGTTGCGTCC TTCTGCTTGC CCATGCTC

AT5G01950.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G01960.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G65040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR