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GT22184

CSHL Arabidopsis genetrap mutant lines

Original: GT22184

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22184

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22254873 [Map]; Strand: c
      • AT3G60220.1 - [+] show detail - TOXICOS EN LEVADURA 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22184 - 5-prime edge 
    GAGGTATATC GTCGCGTGCG ATGTCGTTTA GAAGCTCTGG TAGATTTTTT 
    ACTGGGAGTA GTCGTCGGAG TGAGGAATTG ACGGTGATGG ATTTAGAAGC 
    GAATCATGCC GGAGAAGAGA TAAGTGAGCT TTTCCGGTGG CTCTCAGGGG 
    TGTGAGTGAC AGGTGAGTTG GTGACATTTG TTCATTCACT TGGAAAAAAA 
    AACAGAGCAT TACTTTTGGT TTGTACATAT AAACACTATT TGAAGTTCTT 
    TGCTTCAATT ACCGATTTTT TTTTTCTTTT CTCTCGACAA AAACAAATGA 
    TTTCCCTAGT TATATATAAT TACTTTTAAA GGGCCATTTT TCCCTTTTAT 
    TATGCCCGGG GGGA

AT3G60220.1

Model type
Protein coding
Short Description
TOXICOS EN LEVADURA 4
Curator Summary
Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).
Computational Description
TOXICOS EN LEVADURA 4 (ATL4); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 8923 Blast hits to 8901 proteins in 292 species: Archae - 0; Bacteria - 8; Metazoa - 2301; Fungi - 667; Plants - 4759; Viruses - 54; Other Eukaryotes - 1134 (source: NCBI BLink).
Link
InterPro Scan - TAIR