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GT22192

CSHL Arabidopsis genetrap mutant lines

Original: GT22192

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22192

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20672766 [Map]; Strand: c
      • AT1G55360.1 - [+] show detail - Protein of Unknown Function (DUF239)
        Distance: -4040; Region: intergenic
      • AT1G55365.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1217; Region: intergenic
    Flanking Genome Sequence: GT22192 - 5-prime edge 
    GTGTGCTTAG GTTGATGATA TTGGGCAAAG GTTGTGTTAT TTGTGATCTC 
    AAAGAAGGCT TTTAATAGAC TGATTCTGTG TGAGAAAGTT ATAATAATGT 
    TAGTTTGTTC TCATTTCCTA GTAAGACTCT ACACAAACCG AGTGGTTTAG 
    ACACTGAGAT TAAAATCATG AACCCAATAA ACAAGTTTTC TCAGATTGGA 
    AATCTTGAGA GACAGGGACT TCTTGTGGTT TTGGATAGGT TAACATAAAA 
    GTTCTCTTTG ACAAAATTGT CTGCTTTTCC TTAACTCCTC AAGTCCCTTG 
    TTGCATCACA AGTGATTGTT GTGTCGACAA TCAAGTGATC GATTTGTTGA 
    TAGTATGCAA TGATAAACAG TCTAGTATTT GTCAACAATC TTCAAAGAAT 
    TACAAATTAT CTCTCTCTCT CTCTTCTTTA CATGAAAACA TGGTCTACAT 
    CTTCATCGCT CTCGAACTAC AATATATTTG AGTTGAGCTT TTTTTTTGTT 
    GTTATAGGGT ATT

AT1G55360.1

Model type
Protein coding
Short Description
Protein of Unknown Function (DUF239)
Computational Description
Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G55365.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13500.1); Has 29 Blast hits to 29 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR