1. Home
  2. Mutant Lines
  3. GT22199

GT22199

CSHL Arabidopsis genetrap mutant lines

Original: GT22199

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22199

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 178920 [Map]; Strand: c
      • AT1G01480.2 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 520; Region: intergenic
      • AT1G01490.2 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 1139; Region: intergenic
    Flanking Genome Sequence: GT22199 - 5-prime edge 
    TCTGTCGACA CACGCCTTAC CATCAGCACT TAATTACCTA ACAAAGTCGT 
    AGTACCATAT AATATATGTA ACAAATTTAT CAATCTGAGA TCTGTAAATT 
    TTATCAAATA ATAGCTAATG GTTTACCAAA AGAGGACCAA AAATAAATAC 
    TATAACATTC AAGCTGACGG TTTATCATTA ACAAAGAAAA AGGGGAAAGA 
    AAGCTGACGA TTATTGAATA ATTGATGGAG ACGTCATCAT GTTTGATAGC 
    TGATTATTCT AAGCAAATTT GTCACTTTGT AACAAAATAA TAAGTTGAAT 
    TTAATCATAT TTGGTGCAGC TGAAATGCTG ATGAATCTTT CATCACCCAC 
    AATATGATAG GCTAAGGCAA ATTCCAAGAT ATAAAACTTA ACATGCATTT 
    ATTGATTATA TCTCTGTATA ATCGGATGTT CAATTTAGTA CATATAATGA 
    TTATTTTAGA AAAAGGATAG GCATGTTGGC ATGCTCGTGT GACGTATTGG 
    GCGAACAAGA AAATGCGGTT CTAGAAAAAA TCGAACAAAT TAGGTTAACA 
    AATCCTCCAT TACTCACAAA ACATTATCAA CCTCCCCAAC TAATAAACTC 
    TGGTGATCCT TATCAAAAGA CAATGTTTCA TTTATTACAC ACAAAAACAT 
    ATAAGAAAAG CATATATGCT ACACACCAGC ACCACTAGGA CAATCCATCG 
    ATTAAAATCC TAAGCGGAAA AAAGAAACAG AATCAAACAC ATAAAATCTT 
    AAAAGTTACC ATTTGACCCC AGGAAAAAAG CTGGCCGTCA AAAACAACCC 
    TAATGTCGAA ATTGAATTAT T

AT1G01480.2

Model type
Protein coding
Short Description
1-amino-cyclopropane-1-carboxylate synthase 2
Curator Summary
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.
Computational Description
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 28365 Blast hits to 28364 proteins in 2923 species: Archae - 821; Bacteria - 19365; Metazoa - 634; Fungi - 793; Plants - 1286; Viruses - 0; Other Eukaryotes - 5466 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01490.2

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR