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GT22204

CSHL Arabidopsis genetrap mutant lines

Original: GT22204

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22204

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5731482 [Map]; Strand: c
      • AT3G16830.1 - [+] show detail - TOPLESS-related 2
        Distance: -52; Region: promoter
    Flanking Genome Sequence: GT22204 - 5-prime edge 
    GCGAACATTA AGAAAAAGCT GACCCCAGAG ATGCTACAAA ATTTCTATTT 
    ATATTTTTTC ATTTAATAAA AAAGGAAAAA GATAAAGAAA AAAGTACGAC 
    TTGTTCTCCA CTTTCTTCTC TCTCGACG

AT3G16830.1

Model type
Protein coding
Short Description
TOPLESS-related 2
Computational Description
TOPLESS-related 2 (TPR2); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 3 (TAIR:AT5G27030.1); Has 13436 Blast hits to 8919 proteins in 512 species: Archae - 16; Bacteria - 3246; Metazoa - 4126; Fungi - 2976; Plants - 1389; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink).
Link
InterPro Scan - TAIR