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GT22226

CSHL Arabidopsis genetrap mutant lines

Original: GT22226

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22226

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26218292 [Map]; Strand: c
      • AT5G65600.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: -139; Region: promoter
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -966; Region: promoter
    Flanking Genome Sequence: GT22226 - 5-prime edge 
    GCTGGTCTCT GTGTCAAAGA GAGAAGCAGC ATTGAAACAC CAATCTTATA 
    TGACATTTTA AAGATATTTT AAAGCGATGA TTTTGACTTA TAGATTTTAA 
    AGAATATTCA AACAAAGTTC AGTGATAGTG ATCTGTTGAT TGGACTCTTT 
    AAATAAGCCC TCTCTTCTTG ACCGTTGTCT AGTTGTTGAA TTGTGTTTAT 
    ATTTTTTCTA ATGCTTTATT TCATTTTCTG TCACAATCTT TCTTCTTCCT 
    CCTCTATGTC TAATTCAATC TTGTTCCTTT CCCTTTTCCT CTTCCTCCCT 
    TTTGTTGTTG ATTCACTTTA CTTCAACTTT ACAAGTTTTC GACAAGGTGA 
    TCCCGGGGAC ATATTTTACC ACGGGGATGC AACTCCCGAT GAAGATGGAA 
    CAGTGAACTT CAACAACGCT GAACAAACAT CTCAGGTTGG TTGGATTACT 
    TATTCAAAGA AGGTGCCTAT ATGGAGTCAT AAAACTGGTA AGGCTTCAGA 
    TTTCAGCACC AGTTTCTCCT TCAAAATCGA TGCTCGTAAT CTTTCAGCAG 
    ATGGTCATGG AATCTGTTTC TTTCTTGCTC CTATGGGAGC TCAACTACCT 
    GCATACTCAG TTGGTGGTTT CTTGAATTTG TTCACTCGGA AGAATAATTA 
    CTCATCTTCG TTTCCGCTAG T

AT5G65600.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin protein kinase family protein
Computational Description
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G10530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65610.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR