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GT22253

CSHL Arabidopsis genetrap mutant lines

Original: GT22253

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22253

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 934353 [Map]; Strand: c
      • AT4G02110.1 - [+] show detail - transcription coactivators
        Distance: -733; Region: promoter
    Flanking Genome Sequence: GT22253 - 5-prime edge 
    GCGCAAACGC AGTCACATGA TTGTGCTTTT CAATTTCTTC TCATTCTACC 
    AAGGCTAGGT TTTTTTTAAC TTTTATCGAC GAATAATCCT CTACAATAGT 
    ATAATAGACT AGTCGCTTGA CGGGGTCATG GTTGATGAGC TTCGAAAACA 
    TATAGAAAAC TTAAGACATC GATTGTGCTA TACATAAATA TTTGGTTGGA 
    ACTACCAATA ACACAAGCGA CCAAGTGACA TACGCACGAG ACAATTTTCA 
    ATCTGAATAA TCATCAAAGT ATTTTAAATT CAAAATTATC CATCGATTTT 
    CTTGAAGTAA TATTTGATCA TGTATATAAT TAAACAGTAA GAGCTTTGAT 
    GCTAACCTAA CCCAACGTAC GTGCGGTAGG CATGATTTGT GTATGAACTA 
    TATACTTCTA AATCCCTTTG TCTTCTCAAC GGCTGGCTTT ATTGGCTCCA 
    CCGTCGAGCC CTTTCGATCT ATTAGGTGAT GTTTTTGATC TCCAAATACA 
    TTTTTGATCG CTTTCTTCTT CTTCTCGACG ACGATCGTGG TTTTTGATGA 
    TTTGCATGAT GAATTTATTG TTGGTGAAAG GTCGACAGCT GCATAACCGA 
    ACGAACTCGA TTTAGAATTT TGCTTT

AT4G02110.1

Model type
Protein coding
Short Description
transcription coactivators
Computational Description
transcription coactivators; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 6090 Blast hits to 4661 proteins in 497 species: Archae - 12; Bacteria - 945; Metazoa - 2581; Fungi - 684; Plants - 424; Viruses - 13; Other Eukaryotes - 1431 (source: NCBI BLink).
Link
InterPro Scan - TAIR