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GT22295

CSHL Arabidopsis genetrap mutant lines

Original: GT22295

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22295

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40071 [Map]; Strand: w
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT22295 - 5-prime edge
    CCTCTACAGA GAGAATCTTC TTCTTCTTCT TCTTTGAGGT TTCTTTTTTT 
    TCTTGGATTG GTTTTGGTTT TGGTTTGTTT GGTGAGAGCG TTTATAGGCT
    CTCCGAATAA TAAGGGAAGA TCATCAAATT GAAAAGATTT TTGTTTCTCT
    ATTTTTGGGC CTTCTTTATT TCTTTTTCTC TCGAAAATGC ACACACACAG
    AGAAGAAGAA GATGGTCAAA GAGCAAGAAG AGATTATGAG GATTTAAGGG
    ATAGTCAAAG CTTAATTAAT CACTCTAGTC TCTATCTCTT ACATTTAATT
    TTCTACAGAT TTAGTTTCAC TCTTGATTAA TTTAGTTATT ATAGGTAGAT
    TAACTTTACT TTTATTATTA ATGAAGCTTT CATCATCCTT ATGGATCTTA
    CTTTAGGGTT CTTATGGGAA CAAATGTACT TTCATCGAAT TATCATTCAA
    ATACTGATTC ATCTCTCTCG A

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR