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GT22342

CSHL Arabidopsis genetrap mutant lines

Original: GT22342

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22342

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20758859 [Map]; Strand: w
      • AT3G55950.1 - [+] show detail - CRINKLY4 related 3
        Distance: -2464; Region: intergenic
      • AT3G55960.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 1598; Region: intergenic
    Flanking Genome Sequence: GT22342 - 5-prime edge 
    GAAAAAGATA AATAAAAATG TAAACGTTTT AGTATTTTTT GAATTATATA 
    CAAGAAAATG TCGAACCAAA ACTCATATCA ATCTTTAAAT TTCTAGTAAT 
    CAACCTAGAT TGAAATCATA ATGAGACAAT ACATATCATG TTCTCCAACT 
    CTAGTGAAAT TTTCAACTAC TAAACCACCA TAAATTTGTT ATTCATTAAT 
    ACTTTTTACT CAATTTTCGA TAATATGATC TATTGTAGAT AAGTCCTTCA 
    TATTTTGTTA TAGAATACTT TTTTGCCAAA ACCCGGAGGT GAAGAATCAA 
    TTAATCAAAA ACGGTTTATT TATTTATACA TTGATAAACT GATTTCTAAA 
    AATATGTATA TCTGAGTCCC TGAGTGATCT ATACATACGC TGCAGTTTTC 
    ATAAAAATTT CTTATCTATA ATTAAGCGTG CTGATTTGAC AAAAAAAAAA 
    AAAAAAAAAA AA

AT3G55950.1

Model type
Protein coding
Short Description
CRINKLY4 related 3
Computational Description
CRINKLY4 related 3 (CCR3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 4 (TAIR:AT5G47850.1); Has 117697 Blast hits to 115463 proteins in 4296 species: Archae - 105; Bacteria - 13273; Metazoa - 42642; Fungi - 9844; Plants - 33569; Viruses - 607; Other Eukaryotes - 17657 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G55960.1

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 425; Plants - 384; Viruses - 0; Other Eukaryotes - 637 (source: NCBI BLink).
Link
InterPro Scan - TAIR