1. Home
  2. Mutant Lines
  3. GT22389

GT22389

CSHL Arabidopsis genetrap mutant lines

Original: GT22389

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22389

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 193448 [Map]; Strand: c
      • AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: -431; Region: promoter
      • AT4G00440.2 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: -431; Region: promoter
      • AT4G00440.3 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: -431; Region: promoter
    Flanking Genome Sequence: GT22389 - 5-prime edge
    TAGATAAATT ATAAGAATAA GTGAAAGTGA AACTATAGGG GTCAAATTGT 
    AACGTTTAGA GAAAGAGGGT GCAAATAGAT AAATTATAAG AATTGAGTGG
    GCGCGGCCAA AGAGGAGAGA CGTAATTGGT CATTGGTGCT TTTGCTTGGC
    TGGTTATGGA ATATGGAGAA CACGTAGTAT TTGAGATTAT TACACCAAAT
    GCGATTGTTT TCATTGACCA AGTCATTAAT CTAAAGTTAA CGACGACGTT
    TTGTCATTCT CTTAAGGAAG AGTTGTGCTT TTCTAAACCA TGTCCGAAAA
    CCGAGTGTAA CCAAAACATT AGCTAGAGTT CTTCTCTCTC GCCTAGATTA
    TAGATATAAT ATTTTGTTGT GACTCGTGTG CATATATTGT AACGTCGCGT
    CAATCGTCTC TATCTTAACT CGAGTTTGAA TCGCAAAAAA GAACTGATAT
    ATAATATTAA ATACACAAAT AGAACTTTAT AATATCAAGA AACTATTTAT
    TTCTTTGATT CTAATCAAAC AGAGCATAAT TGAATGTTAG AACTCGTACT
    TAAAGTTTCC GTTAAGGAAA ATGTTTTGTG GGGTTTGCTG ATAAAGTCAA
    GCACTTTATG GTACAACAGA AATAATTAGC TTGCATTGTC TGATTCATC

AT4G00440.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Link
InterPro Scan - TAIR