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GT22439

CSHL Arabidopsis genetrap mutant lines

Original: GT22439

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22439

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17622006 [Map]; Strand: c
      • AT1G47860.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22439 - 5-prime edge 
    GCCCGCGACT TAGGTGAATT GGACGGATTA CAGAGGATGA TTTCTTCAAC 
    AAGCATAAAT GGAGTAAGAA CGAGCCGATT GGAGATGAAA GACGAGCTTG 
    AGGCCGGAAG ACGATCTTGA TAGCTGAACC TTGGAAAAGG GTGGCTACGT 
    ACCCTTAGAA AGGGATCAAG CCACACGTAG TTCATCTCAC TCGA

AT1G47860.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 9.0e-40 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR