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GT22480

CSHL Arabidopsis genetrap mutant lines

Original: GT22480

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22480

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 30976 [Map]; Strand: c
      • AT2G01029.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22480 - 5-prime edge 
    CACTCTTTTG CCTCAGCTTC TTCTCTCTGT CTATCCAGAT TCTTAAGCTC 
    TTCTCTTAAT AGCCGAACCG CGTTGTTTTG CATATACTCC CATTGTTTCA 
    CGAGGTTGGT TAGTTGAGAG GAGCCTTGCT GAGTCAAACT CAATAGTTCT 
    GGTAACCGTG TCAAATCTGC AATGGTCGGT TTCTCTTCGA TTGTGACTTC 
    TTTCAACATG CCTCGACTAG GCGATCTATG TGTGGCAGTG GATAACTGTC 
    TTTAGGGCAA GCCCTGTTTA GGTCGGTGTA ATCCACGCAG ACTCTCCACT 
    TACCATTCTT CTTTTTGACC ACGACTGGGT TGGCCAGCCA TTCTGGATAT 
    TGTACTTCTT TAATCAGGCC GGCTTTTAGG AGCCGCTCGA CCTCGTCTTG 
    GACGGCTTTG GCGCGGTCTG ACCCCAGCCG CCTTCGCTTT TGGCGAACTG 
    GTTTGAAGGT TGGATCCGTA TTGAGCTTAT GACAGGTTAC CTCCGGGGCG 
    ATTCCTGTCA TATCCTTCGT AGACCAAGCA AAAGATGACG ACCTCGATTT 
    CAGGAAGGCG ATCAGCTCTT CCTTTATCTC TCCTTCTAGC TCGCTTCCGA 
    TACCGACCGT CCGAGATGGA TCCGACTCGT CGATGTTGAC CTGGATAATC 
    CTGGCACTTG GCGCCTTCAT TGATTCGCGA GCTGGTCGCT CCGACGGCGC 
    AGCTCGCTCT TCGTCCTTTA A

AT2G01029.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 1.7e-215 P-value blast match to GB:AAD11615 prpol (gypsy_Ty3-element) (Zea mays)
Link
InterPro Scan - TAIR