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GT22483

CSHL Arabidopsis genetrap mutant lines

Original: GT22483

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22483

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3435947 [Map]; Strand: c
      • AT3G10970.2 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G10970.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G10970.3 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT22483 - 5-prime edge 
    TCGCTTTCCT CACTCTAATT TCTCCTCGAA TCTCAGCTTT CAGGTTTGTA 
    TTAGTATCCT TAGTCTTCTG CTTTAAGATT TGATTCGAAA TCAATGGAGA 
    ACAATTTTAA AGTTCTGAGA TTTTCTATTT TATTTTCCAG ATACCGAAAG 
    ATACGAAGTT GGTGAAGCAG CGTTTGGTAG TGAGAAGTTC CTCTGGTTCT 
    GATTATCAAA ACGGCGACGT TAATGGGTTT CCTCTCAAAC CAAACAAACT 
    CTTTATGCAA GAGGTAAATT TCTTATGTTT TCCTGTGTTT TTGTTGATTG 
    AGAAGAGGAG ATTAAATGGA TTTAGTGATG ATTTTGTTGA ATTTTAGGCG 
    ATTGGAGCTG AGTATGGAGA AGGGTGTGAG ACTTTTAGAC AGGATGGTCC 
    TCTT

AT3G10970.1

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 4274 Blast hits to 4272 proteins in 1370 species: Archae - 31; Bacteria - 3851; Metazoa - 11; Fungi - 7; Plants - 184; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10970.2

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10970.3

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 3249 Blast hits to 3249 proteins in 1169 species: Archae - 14; Bacteria - 2940; Metazoa - 3; Fungi - 1; Plants - 144; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).
Link
InterPro Scan - TAIR