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GT22496

CSHL Arabidopsis genetrap mutant lines

Original: GT22496

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22496

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 30981 [Map]; Strand: c
      • AT2G01029.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22496 - 5-prime edge
    TCTTCAACTC TTTTGCCTCA GCTTCTTCTC TCTCGACCTA CCGATTCTTA 
    AGCTCTTCTC TTAATAGCCG AACCGCGTTG TTTTGCATAT ACTCCCATTG
    TTTCACGAGG TTGGTTAGTT GAGAGGAGCC TTGCTGAGTC AAACTCAATA
    GTTCTGGTAA CCGTGTCAAA TCTGCAATGG TCGGTTTCTC TTCGATTGTG
    ACTTCTTTCA ACATGCCTCG ACTAGGCGAT CTATGTGTGG CAGTGGATAA
    CTGTCTTTAG GGCAAGCCCT GTTTAGGTCG GTGTAATCCA CGCAGACTCT
    CCACTTACCA TTCTTCTTTT TGACCAAGAC TGGGTTGGCC AGCCATTCTG
    GATATTGTAC TTCTTTAATC AGGCCGGCTT TTAGGAGCCG CTCGACCTCG
    TCTTGGACGG GTTTGGCGCG GTCTGACCCC AGCCGCCTTC GCTTTTGGCG
    AACTGGTTTG AAGGTTGGAT CCGTATTGAG CTTATGACAG GTTACCTCCG
    GGGCGATTCC TGTCATATCC TTCCTAGACC AAGCAAAAGA TGACGACCTC
    GATTTCAGGA AGGGCGATCA GCTCTTCCTT TATCTCTCCT TCTAGCTCGG
    CTTCCGATAC CGACCGTCCG AGATGGATCC GACT

AT2G01029.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 1.7e-215 P-value blast match to GB:AAD11615 prpol (gypsy_Ty3-element) (Zea mays)
Link
InterPro Scan - TAIR