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GT22506

CSHL Arabidopsis genetrap mutant lines

Original: GT22506

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22506

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 116137 [Map]; Strand: c
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT22506 - 5-prime edge
    CTCGAAGGGG AGACATTAGC CACAAAACAA GAGGGATCTT GGGAAGAAGA 
    CTCTGGCTCT CTTGGTACAT TCTTCTTCCT CTACTACTTC CTTTGAATCT
    TTTCTGAAAA AAAGAAAGAA ATAAAATCCA TATGAGCACG TTTCTTGGAT
    GGCAAGTATC ATGGGCAGAG TTAGAGAAAG AAAGAACAGA ACTCACCAAG
    GGTGCGCTCT GCATCGCTTT CCGGTTCTTC GGGAAGAGAC ACTTCATTAG
    CTTCCTCTTT TGGCTCATTG GGTAACAAAC GTAGAACAAG AGTTCCTGGT
    CTTTTGATCA GTTTGAAAGT GTAGTTATCG CCAGCTTTAA GCCCATTGGC
    ATCACAAAAA CTCACCCACC CTCCTCTAAC ATAAACTGGT CCGGTTGATG
    GCTTTTGTCT CAAGTTAAAA TTCCATGATC TGGCCTTTTC ATTCATCAGA
    ACAATCTCTC CAGATCCGAC TACACCATTA TCCCTCACAA AACCCCTTGG
    AAATCTCTGA AAAATTCATT AGAATACAAC ATGAGTTCAG ACCCTAGAAT
    GAGAGTTTCT TTTCGGGTTC TTAAGAGTCA AATACCATCA AGTCATAACG
    TAGACTCGAA GGGGCAACAT TAGCCCCAAA ACAAGAGGGA TCTCGTGAAG
    AAGACTCTGC TTCTCCATTT GGATTCTCCT TTCCTTTCTT TTTCTCTGAG
    AAATAATAGA ATCTAAG

AT4G00260.1

Model type
Protein coding
Short Description
Transcriptional factor B3 family protein
Computational Description
maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR