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GT22536

CSHL Arabidopsis genetrap mutant lines

Original: GT22536

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22536

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15954375 [Map]; Strand: w
      • AT4G33070.1 - [+] show detail - Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22536 - 5-prime edge 
    CGTTTAAAAC GCTGAGTCCA CCAACGGTGA AGGTAACAAC GCAAGCGCCG 
    ACTCCACGAG ATCTAGCGTA ACCGTCGGCA GCGTAACCGG CGTTTAGCTC 
    GTTACAACAT CCGATTAGGT TGAGGTCCGG GTCAGCCATG AGGTGATCAA 
    GCAAAGTGAG GTTGAAATCT CCGGGAACAG AGAAAACATC CGTAACGCCG 
    GCTTGGACGA GACGACGAGC TAAGTGACGG CCGAGAGTCG CGTCGCAGTA 
    GTTGATGGTG ATAGCGGAGG AAGGAACAGA GTTGTGGATT GTTGCGACGG 
    TGCCGTTTGT TGGACTACAG ACGTCGCCGT TCGTCGGCTT GCAATCATCG 
    ATCGATCCGA TTTTGGTGTC CATGGAAATG GGAAGGTTTG AGTTCACTAA 
    CAGAGAAATT AAAAAACTGT CAAGTTTGTG TATGTGTGTG AGAGAGATAC 
    TCTTTTTATT TTTGGGATGA GTAACAAAAT GAGAATGGGA GAGGTTTTTA 
    TATAGTTGTT GGATTAGAGA CTAGGAGGAA TACATGGGTG GTTTTTTGAC 
    TAGTGGTTTT TGGTTTCTGT TTTCTTGTGC AAAAAGCAAA AAAATAATAT 
    CTAACTTTGA GATTTGACCC AAACATTCTT CTTCTTAATT ATTGTTTATG 
    TCGGTCTAAA ATGCATTTAC TGTTTTAGTA TCATACTACT CCCAGTAAGG 
    CTGTAACAGA TTATTACCAT TGGAAATATC TTAATTTTCC CAAATTGAAC 
    ATCAATACAT CAGTTATTTT TGTGATTCTC CTCTTAATTA TGACCTAATT 
    TGTTAT

AT4G33070.1

Model type
Protein coding
Short Description
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Computational Description
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink).
Link
InterPro Scan - TAIR