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Mutant Lines
GT22621

GT22621

CSHL Arabidopsis genetrap mutant lines

Original: GT22621

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22621

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 3484878 [Map]; Strand: c
- AT5G11010.1 - [+] show detail - Pre-mRNA cleavage complex II protein family
  Distance: 0; Region: intron4 (CDS)
- AT5G11010.2 - [+] show detail - Pre-mRNA cleavage complex II protein family
  Distance: 0; Region: intron4 (CDS)
- AT5G11010.3 - [+] show detail - Pre-mRNA cleavage complex II protein family
  Distance: 0; Region: intron4 (CDS)

CATCACCATA GTAAGAAGCA TCTGAATCAT CAAACAAAAG AGAAAGGGGA 
ATAAGTCGCT TAAATTCTTA ACATCACAAA ATTTGCTTGA TCCAAACTAA 
CCTCTCTGGT GTCTTTACAC ATGGAACTGT CCAATCCGAT TCTACAAAGT 
AGAAAATATA ACCAGAAACA TAAGTGACTG AAACAGCATT ATGAAAACAA 
GTTTTCGGAA TGCAAACAAC AAGAATCGTG AAAGCAATAA GTATGAGGGT 
TACCTAGAAT TGATTTATCA ACAATTGTGA GAGAAAGGAA ACCAGGTGCA 
GTAAATTCAG GCTGGCCAAC ATCAGTATCC AAATAAGCAA CCCTTTTGTA 
TCTGTAAGAA CCACAAAGGT CAATTGTCAG CAAAACTTAT CGAAACAAAG 
CAACCATCAT AAGCCACTTA AGAAAATTGC ATCCATTCAA ACTAAATCTG 
GTTCCATTCA AATTATAAGA AGTAGAAGGT CAAGACAGTT TTCCCCTGAT 
CGGAAAAAAA AAAAAAAAAA AAAAATTTTT TTTTTAAAAA ACAACCCCCA 
AAACCCTTTA AAAAAAGGGG GAAAAAAAAA AAAGGGGCAA GGGGAAAAAA 
AAACTTTTGG AAAAAAAACT TCCAAAAATT TGGGAAAAAG TGTTTTTTTC 
CCCTTTTTTT

AT5G11010.1

Model type: Protein coding
Short Description: Pre-mRNA cleavage complex II protein family
Computational Description: Pre-mRNA cleavage complex II protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP-similar protein 3 (TAIR:AT3G04680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G11010.2

Model type: Protein coding
Short Description: Pre-mRNA cleavage complex II protein family
Computational Description: Pre-mRNA cleavage complex II protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP-similar protein 3 (TAIR:AT3G04680.2); Has 601 Blast hits to 594 proteins in 238 species: Archae - 54; Bacteria - 6; Metazoa - 220; Fungi - 142; Plants - 83; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G11010.3

Model type: Protein coding
Short Description: Pre-mRNA cleavage complex II protein family
Computational Description: Pre-mRNA cleavage complex II protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP-similar protein 3 (TAIR:AT3G04680.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR