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GT22626

CSHL Arabidopsis genetrap mutant lines

Original: GT22626

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22626

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20937127 [Map]; Strand: c
      • AT5G51545.1 - [+] show detail - low psii accumulation2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT22626 - 5-prime edge 
    CCTTTTTAAA CAACGATCTC TTATCCCTTG AGAATGAATG GTCCTTTGGT 
    TCTTGGAGAT AAAAATGGGA AACAATGGGC TATTCTCTTC TGAACCCTTT 
    AGAAGAGTGA TTCTATTCTG CAGAAAGAAA AAGCTCTGTT ATAATCTCAC 
    AACATCCAAA TATCTCAAAG AAAAGATAAT CAAAGCTGGA TATGAGGCCA 
    CCGAAATTAA TTAGGGATTC TACATGACGG ATATCAACAC TAATAGATCT 
    CGGCTAATCT AGTCTATATG TATATGAATC CCTGGACTCA CTTTGAGGCC 
    CTCGACTGTT AAACAAACCA AACCAAGTTT TATGCAAATA AAACAGATTC 
    AATACCTGAA GCAGCGAGAA TAATGCCTTC GATGAGGATG ACGATACCGA 
    GACCAAGCCA AGTAAGAAGA AACGAGTTCT CGTTTTGTCT CTGCTCCTCT 
    GCCTTGGCCG CTCCTTCTTC GCTCTTCTCC ACAGGAGCAC GCCGATTCAC 
    CTCTCTATTA CCTCTCCCTT TCTTCTCT

AT5G51545.1

Model type
Protein coding
Short Description
low psii accumulation2
Curator Summary
Encodes LPA2 (low psii accumulation2), an intrinsic thylakoid membrane protein required for efficient assembly of Photosystem II.
Computational Description
low psii accumulation2 (LPA2); INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR