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GT22644

CSHL Arabidopsis genetrap mutant lines

Original: GT22644

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22644

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26110097 [Map]; Strand: c
      • AT5G65330.1 - [+] show detail - AGAMOUS-like 78
        Distance: -229; Region: promoter
    Flanking Genome Sequence: GT22644 - 5-prime edge
    GTTGTTAATC GGGAGGGGTG CCCATCTACG CTCCTACGAT TCGATTCGAT 
    TTCCAATATC TAATGTAGAT TTCCTTAACT AATGGCTCGA TGGTAGAGAC
    CAAAAAAAAG GAAACTTTTA ATTAGTTTCT CGATGGTACT TTATTTTAGG
    CTGTACAAAA TTAAGATCTA ATTAAAAAAA ATACTATAGA TTTGATTGTG
    TAATTATTAA TTGGGCAACA AAAACTTGGA GGAAAAAGGA AAATCTGTCT
    CTAAAAAAAA CTCTTAATTG TTAATTAAGG GTTTTCAAAA AATTGAAAAA
    AGATTTCAAC TCTGCATTTT ATTTCTAGGT TTCTT

AT5G65330.1

Model type
Protein coding
Short Description
AGAMOUS-like 78
Computational Description
AGAMOUS-like 78 (AGL78); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, sperm cell; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 52 (TAIR:AT4G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR