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GT22666

CSHL Arabidopsis genetrap mutant lines

Original: GT22666

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22666

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8849435 [Map]; Strand: c
      • AT2G20560.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT22666 - 5-prime edge 
    TTATTTACAA AAATCGAAGC TTGTGTGGGC TACATATTGC GCCTACGATG 
    TTTCTCGTGG AACATTTTGA CAATTAATAA CACAAACAAC TTCGAGTTAG 
    GCCCAATATG GTGCGAACAC TGGATGTTTC TCATGCAACA ACATTTTGAC 
    ATTACCAGAC AATGGAGGAA GATGATCCTT TTTTCATCTC TCTCGACAAC 
    ATGCCACCTC CGGATGCAGG TGGAGCTACT TACTTCTCTA CCGGGGATGG 
    TCCAACGTCC TTCAGGTTCA ACCCGAGAAA TGCGGATGAT ATATTTGCTG 
    AGTTCTTTGG CTTCTCTAGC CCATTTGGCG GCGGAAGAGG TGGTACAAGA 
    TTCTCTAGCA GCATGTTTGG TGATAATATG TTTGCTTCTT TCGGCGAAGG

AT2G20560.1

Model type
Protein coding
Short Description
DNAJ heat shock family protein
Computational Description
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink).
Link
InterPro Scan - TAIR