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GT22667

CSHL Arabidopsis genetrap mutant lines

Original: GT22667

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22667

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8849441 [Map]; Strand: c
      • AT2G20560.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT22667 - 5-prime edge 
    TGGTAGCTGC GTCCTCTGTG TTTTCTAAAA TATCTTCGAA GTTGTGGATT 
    GATTGTTAGG ATTACTTGTC TCTATTGGGT ACACGTATTT GTGATTTTGA 
    GTCTTTGTTC CTGTTTACTG ATTCTCTGGA TGCTTACAGG TACTAAGTGA 
    TCCTCAGAAG AAAGCTGTGT ATGATCAATA TGGTGAGGAA GGTTTGAAAG 
    GGAACGTGCC ACCTCCGGAT GCAGGTGGAG CTACTTACTT CTCTACCGGG 
    GATGGTCCAA CGTCCTTCAG GTTCAACCCG AGAAATGCGG ATGATATATT 
    TGCTGAGTTC TTTGGCTTCT CTAGCCCATT TGGCGGCGGA AGAGGTGGTA 
    CAAGATTCTC TAGCAGCATG TTTGGTGATA ATATGTTTGC TTCTTTCGGC 
    GAAGGAGGAG GCGGTGGTGG TGGCTCGATG CATCACGGTG GAGCTAGGAA 
    GGCTGCTCCT ATCGAAAACA AGTTGCCTTG TAGCCTTGAA GATCTTTACA 
    AAGGAACCAC CAAAAAGATG AGGATTTCTA GGGAGATTGC TGATGTCAGT 
    GGGTAAGTGA TCATCAAACC TAATGGAACC CTATACGTTA GCTTGGCTAT 
    TCAGTTAGGA AACCGTTGGT TTGGGTGTTT CTTTGGTAAT TCATAGTGAA 
    AGCAGAATGT TGATCCTAGT TCGTAACCTT GTTTAGTGGG GAGGCTGACC 
    ATTTTATGTG TGTTTTCTTG CAGCAAGACG ATGCA

AT2G20560.1

Model type
Protein coding
Short Description
DNAJ heat shock family protein
Computational Description
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink).
Link
InterPro Scan - TAIR