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GT22676

CSHL Arabidopsis genetrap mutant lines

Original: GT22676

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22676

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 175098 [Map]; Strand: c
      • AT2G01400.1 - [+] show detail - unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; B...
        Distance: 0; Region: exon2 (3UTR)
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT22676 - 5-prime edge 
    GTAGTAGGAA ACCTAGCACA GAACAGCATG TGGTGTGGAA ATGAAAGGTA 
    TTGATTCTGA CATTTGTGTA GCTAAAAGAG AGAGAGAGCT TATTGTAGCA 
    AGTTTGCTTC AACGACAAGA GGTGGAGGAA GTAGAGGAAA CACTTCTTCT 
    TTCTCTAACT CTTTCTCTAT CTTTTGGTTA CCTGACTTGG TGTTGGGCTC 
    TGACTCTTCA GCTTTGGCCC TCAGCTTCTC CAATGCTTTC TTTCTGTTCT 
    CCTTTCTCCC TACTCGAGCT TCTGCGGCTT CACTATTGAG AATGTTGATC 
    CCTCCAAGAA ATCCAGCAGC TAGATACAGC ATAGTGTTTC TTCTGGAAAC 
    ATCTTTGGAA TCAAGGACTT GAAGCTTCTG AGGTTCCTTG ATCTTTGCTT 
    CAAGTAAAGG CTGCCAAAGA CAAGGCATAA GAGACTGACT TCAGAGATAT 
    ACACTAACTA ACAAAACCAA TGCAGACTCA ATATTAATCT T

AT2G01400.1

Model type
Protein coding
Computational Description
unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR