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GT22682

CSHL Arabidopsis genetrap mutant lines

Original: GT22682

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22682

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28315409 [Map]; Strand: w
      • AT1G75450.1 - [+] show detail - cytokinin oxidase 5
        Distance: 0; Region: exon5 (CDS)
      • AT1G75450.2 - [+] show detail - cytokinin oxidase 5
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT22682 - 5-prime edge 
    GTGTCGCGGA TCAAACTCAG CCTTTAAGCT TCTGAACCGA TCCCACTTGT 
    CCCCAAAATG AGCCACCCAC TCTTCCTGTG TTGCGTGGTG AGGAAGATAC 
    TGCTTCACAT TGATCTTGGC TTGTTCACAG AACTCCAAGA TCCGACGGTT 
    CTGATCTTTC AGATACTCTA GCTTCTGTGT CTCTTCACCG TCCGTTAAAG 
    CTGATCTCAA TAGAGCCACC AGATAGAAAA CTTCCTCATC CGGCGTCACG 
    GCTGAGCTCC TCTCGTCCCA TCTGACAATA ACATCAAATT ACGACACGTC 
    AGCAACGACA ATATCTATAT TAATGTAATA ATCAATGATG TGTGGAGGGT 
    TCGTTGAGAT CGGTTTGGTC TAGGAGAATC TGATTGGGAC CCACCCACCA 
    TGAGTTCTAG GAACTTAAAA ACAAATAAAC CCAATCTGGA CCATCGGATT 
    TGGTCACAAA ACAAAAAGAG AAATACGAGC CGACGAAGTG TTGTTGTCAA 
    TCTTAGCTGG TTCGATGCAC ATGTGGACAA CGTTTTTCGG ACAATCCCAT 
    GTACCACGTG TCTAGTTTTT TTCAATTTTG ACAAACTTTT TTTCTTGGAC 
    CACTAATTAA TCCCCACAAG TGTAACTTTG CATGCATGCA ATGCAAAACT 
    CGTTTTATTT CTTTTTTTC

AT1G75450.1

Model type
Protein coding
Short Description
cytokinin oxidase 5
Curator Summary
This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description
cytokinin oxidase 5 (CKX5); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 6615 Blast hits to 6610 proteins in 1194 species: Archae - 154; Bacteria - 4290; Metazoa - 145; Fungi - 1218; Plants - 369; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G75450.2

Model type
Protein coding
Short Description
cytokinin oxidase 5
Curator Summary
This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description
cytokinin oxidase 5 (CKX5); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1).
Link
InterPro Scan - TAIR