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GT22692

CSHL Arabidopsis genetrap mutant lines

Original: GT22692

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22692

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13958145 [Map]; Strand: c
      • AT4G28080.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -305; Region: promoter
    Flanking Genome Sequence: GT22692 - 5-prime edge 
    TTTCTCCCCT GCTCAAACAC TCTTAAGGAG AATAGAAGAG AGAATAGCCT 
    CGCACCTTAT CCTATCCTTT CTATCTCTCT CTCTATATCT CTATCTCTAT 
    TTTCTCAATC ACTATTTGAC CCCTCTCGTA TCTTATTTCC TTTTACTTCC 
    TCATTGTCAC CACCACTAGT CCCTCATTTA TACACACACA CACACACACA 
    CCCTTCTCTC TTCTTTTTTC CTTCTATCTT CCTCTCTCTC G

AT4G28080.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink).
Link
InterPro Scan - TAIR