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GT22714

CSHL Arabidopsis genetrap mutant lines

Original: GT22714

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22714

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15962871 [Map]; Strand: c
      • AT2G38110.1 - [+] show detail - glycerol-3-phosphate acyltransferase 6
        Distance: -7377; Region: intergenic
      • AT2G38120.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -10122; Region: intergenic
    Flanking Genome Sequence: GT22714 - 5-prime edge 
    AAGAATAAAA TAAAATGAAC GGAAAGCTAA TTTTGGTTTG TTAAAGATCC 
    GTTACAAAGG GACGATGAAA GAAGGACCAT TAACACAAAA GTGGTGGTGT 
    ATGTAATGTT AAGTGTGTAG GGTCAAATCG ATGTTAACAG CAAAAAAATA 
    GTATTATGAA GTTGAAATTA AACCCCATTA TCACAAAAAG AAGTTGAAAT 
    TAATAAAAGA GCCCTCGTCG AGAATAAATG TGTTCTTTCA TCTTTTAGTA 
    ATAGGTAAGT GGGGACGACT AGTACTCCAC ATATGTTAAA AGTTTTAGTA 
    CTAATAATTT TATCCCCTTT TCATGATTGT TTGGGTAGCT TTGAGAAAAA 
    AAATTAAGTT GACAAATTTC TATAAAACTT

AT2G38110.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 6
Curator Summary
Encodes a protein with glycerol-3-phosphate acyltransferase activity.
Computational Description
glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G38120.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Curator Summary
Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.
Computational Description
AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR