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GT22761

CSHL Arabidopsis genetrap mutant lines

Original: GT22761

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22761

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9826999 [Map]; Strand: w
      • AT1G28130.1 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: 0; Region: exon3 (CDS)
      • AT1G28130.2 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22761 - 5-prime edge 
    ACGATGTAAG CTTCCTCTGA GTGTTACATT GGTATCAACC TTAATCCGTT 
    GTGTGATCCT GCCGATGTTT CCTACACGCT TCTTCCTAAC ATGGCTTACT 
    TCGAGTTCAT CTCACTCGA

AT1G28130.1

Model type
Protein coding
Short Description
Auxin-responsive GH3 family protein
Curator Summary
encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.
Computational Description
GH3.17; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT5G54510.1); Has 1405 Blast hits to 1296 proteins in 239 species: Archae - 0; Bacteria - 491; Metazoa - 54; Fungi - 2; Plants - 672; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G28130.2

Model type
Protein coding
Short Description
Auxin-responsive GH3 family protein
Curator Summary
encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.
Computational Description
GH3.17; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT5G54510.1); Has 1092 Blast hits to 1087 proteins in 203 species: Archae - 0; Bacteria - 311; Metazoa - 52; Fungi - 2; Plants - 653; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Link
InterPro Scan - TAIR