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GT22788

CSHL Arabidopsis genetrap mutant lines

Original: GT22788

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22788

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13102855 [Map]; Strand: w
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22788 - 5-prime edge 
    GACTGAAAAT AAGCGTCTTG ATCTATTGGC TGTGATAGTA GATAGTGTCA 
    CAGGTGCACA TGATCGTTTA GCTTGGGGAA TGACTTCAAA TGGGCGTTTC 
    ACAGTCAAAT CAGCAGTTGC ATTGTTGACT AATGATGATT CTCCGAGGCA 
    GGATATGAGT AGTTTATATG GGCGTGTGTG GAAAGTCCAG GCACCGGAAC 
    GGGTACGGGT TTTTCTTTGG TTGATAGTGA ACCAAGCAAT TATGACGAAC 
    TCCGAGCGTA AGAGAAGGCA TTTGTGTAAT TCTGATGTTT GTCAAGTTTG 
    TCGAGGAGGC ATAGAATCAA TCATACATGT TCTTAGGGAT TGTCCCGCTA 
    TGTCGGGCAT ATGGGATCGT ATTGTACCAA GGAGATTGCA GCAGTCGTTC 
    TTCACTATGT CCTTATTGGA GTGGCTCTAC TCGAATCTAA GGCAAGGTAT 
    TATGGCAGAG GGTAGTGACT GGTCGACGAT GTTTGCTATG GCGGTTTGGT 
    GGGGTTGGAA ATGGCGGTGT AGCAATATTT TTGGGGAGAA TAAAACATGC 
    CGTGATCGGG TGCGCTTCAT AAAAGACCTA GCTGCGGAGG TGTCGCTAGC 
    TTACT

AT3G32110.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.9e-52 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)
Link
InterPro Scan - TAIR