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GT22798

CSHL Arabidopsis genetrap mutant lines

Original: GT22798

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22798

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22529124 [Map]; Strand: c
      • AT3G60950.1 - [+] show detail - C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
        Distance: 0; Region: exon18 (CDS)
    2. Chromosome: 3; Position: 22590305 [Map]; Strand: c
      • AT3G61030.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon16 (CDS)
    Flanking Genome Sequence: GT22798 - 5-prime edge 
    TTAGAATAAG AAGAAAAGTA GAATATCTAT GTCAACTACA CGCATTTAAT 
    TTGAGGAGTA CCAGTCCTTT TAAGCCATCT ACAGAATTAG GGACATAAGT 
    ACTTATCAAG TAGAAGGAGT CGAATTCAGC AGTTACCATA CGCCCTTCCA 
    TGTCATGATC TGATCCAGAT AGACCAGTAC CATATCTAAC TCTGAGTGGT 
    TTTATCTGCA AAAGACCAAA CTGATTAAAA CACATACAAT TCAACTTAAC 
    ATATCAAACA TATTGGATAA CATGGATATG ATATCACAAA TAAGCACATT 
    CTTCCATTCT TTTGAGATAT CTTTTGAAGA AACTACTTTA GCTTTCAAGT 
    TTTTCTCACT AGACTGTTTT ACTCCTTTCT CTCTGTTTTC AATGCCATAA 
    GCTTCAGAAC TAATGCATTC ATCTTGAGTA GGCTCTTCTC TGTTTCAGAT 
    CTTTCTTTTA ATCGCGACAC TTTCTAAATG CGTGGAGAAA GTAGCTTCCT 
    TTTTTTCTGA ACCAGAACTT TCATCTGTAA CAAATAAACA GGCAAGGACT 
    TGGTTTTTCA CTTAAAAGAG AAAATTTAGA AGAGACACAG CCCAACAAAA 
    AAATTCTTTA CAGCTCTCGC AAAATAATCA GAAGATATAG CACTTCTGAG 
    ACTTTCATTC TAAATCAAAT GGATCAAGCT TAAAAACTAC TAAATGGAAG 
    CAAGCTCGTG CCTTTTCTCG ATATGATACA TAAAACAGAA AAATGAGTGT 
    TCTTGGTGTG CAGTTACATA CCAGGTAAAA TTGTTGTCCA TATGAAGTCG 
    TAAAGTTGAG ATAAGTTCTT GTTTGCGTCC TT

AT3G60950.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
Computational Description
C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 4425 Blast hits to 4326 proteins in 1442 species: Archae - 111; Bacteria - 2322; Metazoa - 578; Fungi - 318; Plants - 452; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61030.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 4067 Blast hits to 3968 proteins in 1320 species: Archae - 109; Bacteria - 2078; Metazoa - 577; Fungi - 310; Plants - 450; Viruses - 0; Other Eukaryotes - 543 (source: NCBI BLink).
Link
InterPro Scan - TAIR