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GT22832

CSHL Arabidopsis genetrap mutant lines

Original: GT22832

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22832

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 41097 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -908; Region: promoter
      • AT4G00114.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22832 - 5-prime edge 
    AGATAGCTGC AAAGGCTGGG AGAGAAGCTA AGAGAAGAAA GAAAAGCAGT 
    GAGAGTAGTG TCATTGGTGA GTTGGGAGCT GTTTGATGAA CAAAGAGAAG 
    AATACAAAGA AAGTGTGTTA CCTTGAGAGG TTTCAGCAAG AGTGAGCATT 
    GAAGCAGGGT CGACCTTTGG GTGGGAGAAG ATGGTTGGCT CCAAAAGAAA 
    AGCCATCGGC GTAGACAGTT TTGGAGCAAG TGCACCAGCC AATGTGCTCT 
    ACAGGAAATT TGGACTCACC GTGGATACGG TTATTGCAGC CGCTAAAGAC 
    TTTTGTTAAG CTAAGCTCTC TTTTACACAT CATAAAGACA TTTTCTACGT 
    TGTTCAAGTG TGCCTTTCCA CATACATTAC CCGGACTCAC TCACTAGTCA 
    CTATAAATCA ATATCGTTAT GTTTTTATCT TACAATAAGT GAATTTGAAG 
    AATAAAATAG AGCTTTGATG GATATTACTA TTATATATGC GGTCTAGTAG 
    ATGCGTGTTG TTATTATATT ATTCCTTGAA GATTACTCTT TGCTTTTTTG 
    TACCCCATGG ATAAATGTGC CTTGGTATTA AGTTGCAAAT TTGATTTAAT 
    TAATCCCTAA ACATGTTACT AGTTAGAGTT TGCACGTGAC GATCTTGGGC 
    AGCACCTAAA CATGTATTTG TGTGCGTAAT TTTGTAATAA GTAAGTGCAT 
    CGAGTTTGAT GAATCAGTAT TTGAATGATA ATTCGATGAA AGTACATTTG 
    TTGCCATAAG AACCCTAAAG TAAGATCCAT AAGGATGATG AAAGCTTCAT 
    TAATAATAAA AATAAAGTTA ATCTACCTAT AATAACTAAA TTAATCAAGA 
    GTGAAACTAA ATCTGT

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00114.1

Model type
Pseudogene
Curator Summary
pseudogene of transketolase
Link
InterPro Scan - TAIR