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Mutant Lines
GT22856

GT22856

CSHL Arabidopsis genetrap mutant lines

Original: GT22856

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22856

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 222518 [Map]; Strand: w
- AT4G00490.1 - [+] show detail - beta-amylase 2
  Distance: 0; Region: exon1 (CDS)

TAATTCCAGT GAGCGTGAAG CTTGGAGCTC CGACGAGAGT ATCGGCTCGG 
AGCTCGTTAC CGTTCATCTC TCTCGACTGG CGTGGTGTTT CTACATTTTC 
CGGTGCTAGG CCTTTGGTTC TCGCGAAGGT GAAACTGAGA GCAGAGAGTA 
CTGAGGAAGA TCGAGTTCCA ATTGATGACG ACGACGATTC TACTGATCAG 
CTCGTAAGTG TGGAATTTCA TTTGGATGAT TCACTCGTTT GTGACCAGAA 
TCAATTTTAC TCTTCGTTTT GTTAGGTTGA TGAAGAAATT GTGCATTTCG 
AAGAGCGTGA TTTTGCTGGC ACAGCGTGTG TTCCTGTATA TGTTATGCTA 
CCAGTGAGTC TTCTTTTGAT TTCATCTCTC TCGA

AT4G00490.1

Model type: Protein coding
Short Description: beta-amylase 2
Curator Summary: Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.
Computational Description: beta-amylase 2 (BAM2); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 836 Blast hits to 835 proteins in 165 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link: InterPro Scan - TAIR