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GT22858

CSHL Arabidopsis genetrap mutant lines

Original: GT22858

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22858

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5593790 [Map]; Strand: w
      • AT1G16360.1 - [+] show detail - LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT22858 - 5-prime edge 
    GCATATGCTA CCAACAGTCA AATACGCAAT CCCAAGGAAA TCATTCCTTC 
    CACCGAGCCA GCTAGTGGTA GATAGCACAA GCTTCTTTTT CCCATTAAAG 
    CTATAAGTGT TGTAATTATT CTGCAACAAG ACCTTTATCG TATCTCCAGC 
    TTGAAGATCA GTGTCTATTT TGCCATACAG CTTTCTAAAT GTTGGTAAAG 
    CCGCGGTTCG CATCCAGACA ATTAGATCTT CTTGCTCACT CAACTATCAG 
    AACCATACAT TTTTAAAAAT GTTTAGATAT CGATTGATAG CGAGTAGATT 
    GGTTCATCTC TCTCGA

AT1G16360.1

Model type
Protein coding
Short Description
LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
Computational Description
LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 5 (TAIR:AT1G79450.1); Has 865 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink).
Link
InterPro Scan - TAIR