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GT22958

CSHL Arabidopsis genetrap mutant lines

Original: GT22958

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22958

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3478346 [Map]; Strand: c
      • AT5G10990.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 642; Region: intergenic
      • AT5G11000.1 - [+] show detail - Plant protein of unknown function (DUF868)
        Distance: 683; Region: intergenic
    Flanking Genome Sequence: GT22958 - 5-prime edge 
    TTTTCCCTAC TCTGATTACG AATTTACGTT ACTAACCACT TTACTTCATC 
    ATTCGTTTGT AACTAGAACT ACAAGTTGCA GAGAATGTAA AATAAGGACA 
    TGTTTAGTTA CTGATTTTTA TGCGCTTTTA GATACGCAGA CAATTCCAGA 
    TCGACATAAT CTACGGACTT AAATTTCTAG ATATTTTGAT TTGTCATTTT 
    TTTTCAGAAT AGTTGGCAGT AAAGATGGGC CGGCACATCT TGGCCCAGTG 
    TATTTCTAGT CCAGATTTCA TCTCACTCGA

AT5G10990.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G75590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G11000.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF868)
Computational Description
Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G25200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR