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GT22991

CSHL Arabidopsis genetrap mutant lines

Original: GT22991

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22991

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1983252 [Map]; Strand: w
      • AT3G06460.1 - [+] show detail - GNS1/SUR4 membrane protein family
        Distance: 0; Region: exon1 (CDS)
      • AT3G06470.1 - [+] show detail - GNS1/SUR4 membrane protein family
        Distance: -916; Region: promoter
    Flanking Genome Sequence: GT22991 - 5-prime edge 
    AACACGTCAA TCGATGTTTC CTGTTGGGCT CGTGTTGAAC TCGACGGTCC 
    ATGTGATTAT GTACGGGTAC TATTTCCTCT GCGCTATCGG ATCGAGGCCC 
    AAGTGGAAGA AGTTGGTGAC GAATTTTCAA ATGGTTCAGT TTGCTTTCGG 
    CATGGGGTTA GGAGCCGCTT GGATGCTCCC AGAGCATTAT TTCGGGTCGG 
    GTTGCGCCGG GATTTGGACA GTTTATTTCA ATGGTGTGTT TACTGCTTCT 
    CTATTGGCTC TCTTCTACAA CTTCCATTCC AAGAACTATG AGAAGACTAC 
    AACGTCGCCT TTGTATAAGA TCGAATCCTT TATATTTATT CACGGAGAGA 
    CGTGGGCAAA TAAAGCGATT ACATTATTTT CCAAGAAAAA CGATTAAATT 
    GTCATGATTA TTATATATAT ATCTAGTTTG GATATGTTGA TGTGTGTTGT 
    TAGTTGTTAC TGTAAAATGT TGGGATGCAT GGTTTGAAAT TGTTTTATAT 
    ATTAACGAAT AAGATGACAA AATATATAAA AATGTCACAT AAAATCATCA 
    TGATCGTCTG ATTCTTCTTA TTGCATACAT CTTTCTATAC AACATTTGCC 
    AACCAACGTT TCTTTAAAGG ATTGGACACT GAGATTAGTT CTATAATATT 
    TTTTATGCCT ACCAGTGTTG GTTCATCAAC CACTGGTCGT ACCAAACCCT 
    CTCTTTATGA TAATGGAGGA GAGAGTGACC ACGGTTTTTA A

AT3G06460.1

Model type
Protein coding
Short Description
GNS1/SUR4 membrane protein family
Computational Description
GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06470.1); Has 2223 Blast hits to 2217 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 1419; Fungi - 367; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06470.1

Model type
Protein coding
Short Description
GNS1/SUR4 membrane protein family
Computational Description
GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink).
Link
InterPro Scan - TAIR