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GT22995

CSHL Arabidopsis genetrap mutant lines

Original: GT22995

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22995

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7631848 [Map]; Strand: w
      • AT2G17540.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT2G17540.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT2G17540.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT22995 - 5-prime edge
    TTGAGTTACC TTATCATCTC TCAAACAGAG ATGAGAGATA CAAACACAGA 
    GAGATTGAGA GATGGAGAAA TTAGGGTTTT CAGAGAAATG GGGAAGAAGA
    TAGAGAAGAG AGGAGATTTG TTTGTATTGT TGCCATCGCT CTCTCTGATC
    CGTTTTTCGT TTTTATATGT AAACCCTACG AATATCAGTT TTAATTATCT
    CTTAATTGTT ATTTTTTTAC TTCTATCTAA ATTAACTTAC GTTTCTTTCC
    TTTACATTTA CCTTTTCCAT GGAAAAGTAA ACCAGAAAAT TAACTTGACA
    ACTACTATTT GCTTTTCGTT TTATTACTAA ACTGTAATAA CGGCCGTCAA
    TAACTCTTTG TTTTTTTGTT GTTTTTTTAT TTCTTAACGG AGCTAATTAA
    TAAGTTAACA GTAGTATTAC AGATGTAGAC TTTCTATTTG TAGAAATTAA
    AAACTTCATA GATGTACTGG AGGCCTTTTT GGCAAGTTCA TGGCACATTT
    GGTAGCAAAA GTGTTTCAAG AGGAAGCACA AACTATCATA AACTCAACCA
    TTTTTCTTTA TCAAAAAAAA ACAAAAAGGA GTCTGCTTAC CACAAGAAAG
    GATCGATGGT TCGAAAACTT GATGTCAACA ATCCTGCAAG AGAATTTTTC
    TGATGAAGTA AACCACCATA ATTTATTGAA AGAAGTCTGA TTTGTGT

AT2G17540.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 39 Blast hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G17540.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G17540.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR