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Mutant Lines
GT22999

GT22999

CSHL Arabidopsis genetrap mutant lines

Original: GT22999

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22999

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19621626 [Map]; Strand: c
- AT2G47940.1 - [+] show detail - DEGP protease 2
  Distance: 0; Region: intron3 (CDS)
- AT2G47940.2 - [+] show detail - DEGP protease 2
  Distance: 0; Region: intron3 (CDS)

TGCCAGATTC ACGATGCATC CTTTCTCAAC GCTGTTGTCA AGGTTTCGAA 
ATCAAATTCG CTTTCTTCCT TAAAATTCAC TCTGCTTGCT TTTGAACCCA 
CCCGTGCTTC TTTCCAGGTT TATTGCACTC ATACTGCTCC TGATTACTCC 
CTCCCATGGC AGAAGCAAAG GCAATTTACT AGTACTGGAA GGCAAGCTTT 
TTTTTTTTAA ACCCATGTTC CCTTTTTTCC CCCTTTTAGG TTTTTTCAAG 
ACCCCCCCCA ATTTTTTTCA ACTGGGGGGT TTTTAAAATT GGAAAAGGCA 
AGCCTTTGAC CAAGGCCCTT TGGTTCAAAA AAAAAACCAA GGTTTATTTT 
CCTTTCCGGA ATTCATTTTT TTAAAAACGG TTTTTCCCTT CCCATTTTGG 
AAACTTTTGA ACCAAAATTT TTTCCTCCGG TTAAAATTAA AAAAAGGGGA 
AAAAAACCAA AGTATTGGGC TAAGGTTTTT TTTTCCCCCG GAAATATAAC 
TTTCGCTTTC AATTAAAAAA AAAAATGGGC TTGTTTTCCC CCAATTTCCC 
ATTAAAATTC CCAAAAAAAA ATTTGTTTTT TTTTCCTTTA AATTTAATTA 
AAAATGTACC TTGCCCTTTA AAATTAAAAA AAAATTCC

AT2G47940.1

Model type: Protein coding
Short Description: DEGP protease 2
Curator Summary: Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.
Computational Description: DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 15046 Blast hits to 15035 proteins in 2533 species: Archae - 101; Bacteria - 10614; Metazoa - 317; Fungi - 14; Plants - 376; Viruses - 0; Other Eukaryotes - 3624 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47940.2

Model type: Protein coding
Short Description: DEGP protease 2
Curator Summary: Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.
Computational Description: DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR