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Mutant Lines
GT23011

GT23011

CSHL Arabidopsis genetrap mutant lines

Original: GT23011

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23011

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 179775 [Map]; Strand: w
- AT4G00416.1 - [+] show detail - methyl-CPG-binding domain 3
  Distance: 262; Region: intergenic
- AT4G00420.1 - [+] show detail - Double-stranded RNA-binding domain (DsRBD)-containing protein
  Distance: 1548; Region: intergenic

AGTAATCTCC TTCTCTCTGA AAAACTGCTA CCTAAATTAC TAGCAGCAAA 
CTTTGAATCA TACACGCTTC TTAGAATTCA AAGCTTCTGA AAGTCCATCT 
TTGAACAACT CAACCTTTGA TTTATCTTTG CACTTCTGAT ATTTTGACAG 
TCTTAGACCA TTCTGGTAGC TTTCCTTGTA GCTATCTCAC ACTAACTGAT 
ACAATGACGT TCTTGAGGCC CTTTTAACAC AATGATTTAA TCAACCTTGA 
GATCTTTGCA AATCATAGCT TTTGATCATT CTCTGAAATT CCTTCTCTTT 
GAAGCAACAA TATCGAAGGT CTCTTTCTCC TTGTGATAGC AACAGATTCA 
TAAATACTTA AATATGCGAA TCCTTCTCTT TAAGAACGAG CTATGAGAAG 
ACTGATTCTT CACCACTAAC TTGTGTTTTA CGTTTCTTCA ACAAACTTAA 
TTACAGGTTC TTTCATATTA ATAACTCTTC ATGATAAACC AAGTTCTGAA 
GATGCCAACG TAGAGATCAG TCTCAGACTC CATTACTCAA ATGCCTTGTA 
GTTTCAAGCC AATGCTGACA TTCATGTCTC TTTGCCTTTC ATCTCACTCG 
A

AT4G00416.1

Model type: Protein coding
Short Description: methyl-CPG-binding domain 3
Curator Summary: Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
Computational Description: methyl-CPG-binding domain 3 (MBD3); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 4 (TAIR:AT3G63030.1); Has 103 Blast hits to 103 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00420.1

Model type: Protein coding
Short Description: Double-stranded RNA-binding domain (DsRBD)-containing protein
Computational Description: Double-stranded RNA-binding domain (DsRBD)-containing protein; FUNCTIONS IN: double-stranded RNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 1 (TAIR:AT1G80650.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR