1. Home
  2. Mutant Lines
  3. GT23117

GT23117

CSHL Arabidopsis genetrap mutant lines

Original: GT23117

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23117

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 121867 [Map]; Strand: w
      • AT4G00270.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -3290; Region: intergenic
      • AT4G00280.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane...
        Distance: 542; Region: intergenic
    Flanking Genome Sequence: GT23117 - 5-prime edge 
    GGTGTATGAT ATTCTCGAAT TCAAAATAGA AAGCGAAATG TGTTCCACTC 
    TACACCTCTC ATTTTGGTGT AAAGTCCCAT CAATTTAAGA AGCTTCGCCT 
    TTCTTCTCAC TCGACTATTA AGTCATGCAT GCTAATGTAG ATGAAGCTTG 
    TGGACGCTAA GAAATGTGAG TTGTTGTTGG AGAAGATGGA TGTTTTGAAG 
    GAGGTGACTT CGGTGCTTGC TCAAACCAAC TAAGAAGAAG AAGAGGAAGC 
    TATTGGATTG TATTATAGGT TTATCGGTTT TTAATCTCGG GTTTCAATGG 
    AGATGTAATG CCTTCTTTTG TTATCTAACT TAGGATTCAT CTCACTCGAC 
    AA

AT4G00270.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT2G25650.1); Has 282 Blast hits to 277 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00280.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR