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GT23142

CSHL Arabidopsis genetrap mutant lines

Original: GT23142

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23142

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 540476 [Map]; Strand: w
      • AT2G02130.1 - [+] show detail - low-molecular-weight cysteine-rich 68
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: GT23142 - 5-prime edge 
    TGATCCATCC ATTCTCATGA CTCAAATCTT CGATCCATCG TCAGTGTGTT 
    ACTTCTTTCT TCTCTCTCGA CTACGTACGG TACCATGTCG TACCGTACAT 
    GAGTGTTTTC TCAAATAAGT CGTTGGTTTT TGTGTTTCCG GTTTTAATGT 
    AATGTTAAAT CAATTAATGG CTTTTAATAT ATTGTATTAT GGATCTCAAT 
    CTAAAAGTTT TTAATAACCG GAGTCTGCAA AGTAAATCAC AATAATGCTC 
    GAATAGAATT GAGAGAACCG ATCGATTATA TAGAGTTAAT CTGGTTAGAA 
    ATTAGATTGG TAACAAAAAG TCGTACAAAT TTTTTAATTG TTAGCTGTAG 
    TTGTTAGTTT TATCAAAATG ATGCAAAACT GTTAGAAGTA GTTGTAAAAA 
    AAAACTGAGA GTAAAATTTT TTGTAATGTT TTTGATAAAA CTTTTATGAT 
    TAGTAAATAT CAAACCTATA TACACTATTT TGGAATATTA AGTGATTACC 
    ATTCAAAATC AGTATATAAA AAGATCATTC ACTGTGTAGA TGAATAGTAT 
    ATAGCATTGG TATTTGTAAT GTAGATGTTG GTTAAATAAT ACCTCTTTAA 
    ATAACAACCT AGGGAATGAA TAAAATCCAA CATATCTAAT TTCGCAGTGT 
    AAAGCAACAA ATGGAGAGTT TGCTACTAGC CTACTACACG TGTCTTTGGT 
    GTTACCTACA AC

AT2G02130.1

Model type
Protein coding
Short Description
low-molecular-weight cysteine-rich 68
Curator Summary
Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.
Computational Description
low-molecular-weight cysteine-rich 68 (LCR68); FUNCTIONS IN: peptidase inhibitor activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176), Knottin (InterPro:IPR003614), Gamma Purothionin (InterPro:IPR008177); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 69 (TAIR:AT2G02100.1); Has 401 Blast hits to 401 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR