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GT23147

CSHL Arabidopsis genetrap mutant lines

Original: GT23147

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23147

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1949429 [Map]; Strand: c
      • AT3G06410.1 - [+] show detail - Zinc finger C-x8-C-x5-C-x3-H type family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT23147 - 5-prime edge 
    AAGGGTCGCG ATCGGATCCA TCTCTTGAAT GGACCTCTCA TGGTGGTGAA 
    ACCGCTGTTG AAGGTAATGT CTCTTGTTAA AGTTTTGATT TTTCGGGATT 
    AATCTGCGAT TAGAGCTGTG AATTCTGATT CAAATGCGTG TTTTTGTAGC 
    TCCGATGTGG CGGTTAGGGT TGAGCGGCGG CGGCGGAGGT GGAGGAGGTG 
    GAGAATCGTA CCCGGAGAGA CCTGACGAGC CTGATTGTAT TTATTACTTG 
    AGAACCGGCG TTTGCGGGTA CGGCTCAAGA TGTCGGTTTA ATCACCCACG 
    AGATCGTGGA GCGGTAAATG ATTTCTCAGT TTCAGATTCT TCTCCTTATT 
    CACCAATTTC AATTTCAGAT CAGCTACTGA GAGTCTGATG ATCAGATCGT 
    TAAATTGGTC ACTGGGCATT GTTAAATTAA AGCACATATA AACAAACCAA 
    AATGCTTAAG AAGAAGTTTT TTGTAAGCTC TGATTTTGAT GTTTAGGTTA 
    TTGGAGGTGT GAGAGGAGAA GCTGGAGCTT TACCGGAGAG GATGGGACAT 
    CCGGTTTGTC AGGTTTTGTT ATCTGAATCT CTTTCTGATC AAACTATGTT 
    CCGGTTTTAA GCAATGCAGT TTCAATTTAT CTGCTTTTGT TTATTTAAGA 
    GAAATCTGTG AACTTTTTTT TTTTTTTTTT TT

AT3G06410.1

Model type
Protein coding
Short Description
Zinc finger C-x8-C-x5-C-x3-H type family protein
Computational Description
Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 3128 Blast hits to 1576 proteins in 227 species: Archae - 0; Bacteria - 85; Metazoa - 789; Fungi - 248; Plants - 1012; Viruses - 7; Other Eukaryotes - 987 (source: NCBI BLink).
Link
InterPro Scan - TAIR