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GT23151

CSHL Arabidopsis genetrap mutant lines

Original: GT23151

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23151

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2172247 [Map]; Strand: c
      • AT1G07080.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: 53; Region: intergenic
      • AT1G07090.1 - [+] show detail - Protein of unknown function (DUF640)
        Distance: 1705; Region: intergenic
    Flanking Genome Sequence: GT23151 - 5-prime edge 
    CTGCATAAAG GTTAATATAC TACGTATGAG GAAAGTTTTT CTTAATGTCT 
    AATCGTTTCA ACTAAAAACA AAGGTTTAAA GTCTAGATTG TTTATTTACG 
    TTTGTGTAAT ATAACTATCG ATTGTGATGT GTAAACATAA TGTCGAGATA 
    TTGATGTTAT TGTTGCGGTC AACGTCGAAG CGAGTAGTGG GTCACGGTCC 
    TCACTACTGT TCCATCGTCA ACCCTGATAG GCTCCTTTCA TACTACAGTC 
    TACAACTTCA CCGAAACAAA TAAGAGAAAC AAAACCCGTC TAAACCGAAA 
    TAGGTTTTTT ACCCAACATG TGATTCTTGA AAGGCCTCTC ACAACCCAAC 
    AAACATACAT TTTGATGAAA CATAAAGATT ACACACATTC ATTAAATATC 
    AGAATCTAGA TAGCTTTTTG GGGTGGTTTG TTACATGGGA AAAAGATACA 
    GGAAGTGTTC ATCTCTCTCG A

AT1G07080.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Computational Description
Thioredoxin superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: gamma interferon responsive lysosomal thiol (GILT) reductase family protein (TAIR:AT5G01580.1); Has 470 Blast hits to 463 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 320; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07090.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF640)
Computational Description
LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT5G58500.1); Has 311 Blast hits to 311 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR