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Mutant Lines
GT23153

GT23153

CSHL Arabidopsis genetrap mutant lines

Original: GT23153

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23153

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 2945546 [Map]; Strand: c
- AT3G09600.1 - [+] show detail - Homeodomain-like superfamily protein
  Distance: -860; Region: promoter
- AT3G09600.2 - [+] show detail - Homeodomain-like superfamily protein
  Distance: -860; Region: promoter

CCTGTATATA TGTAAGGACC AAGAATAATA TACCATCTTC ATTACTTTAG 
AAGAAGAAAA AATATTTTGA ATCTCTAACA ATTTTTTCAT TTTAACTGTT 
TTGATCAAAA TGGTCTTTCA CCTTCGTAAT TCCCGCGTGG ATCATATTCA 
CACACCACAA GATAGCCACG ACCGTTATTG CATTTCACAC GTGCGCATCC 
AACGGCTGTG GTCTCTCTCC ACACCATCTG CGTGTAATGG CCGCACATCT 
TTCCCGGTGC GCACGTGTTT GTTTTCACGT CGTAGTTAAA CCTTTCCTCA 
AACCATCTCG TCACCACTTT CTCCGGCGAC CACGTCTTCT TACGCCGGTG 
CCAGAAAATG TTCTCACCGT AAGGCCCACC TGAATGTATC ATACTGCAAT 
CGGACTTACG TTGTTTAGCC CATTTATCAG CGAATCGGGC CAGGTCTCTG 
TCCCATCCGA GCGTTGGCAC GCCTGAAGAA ACACGTGCAT CGTTGTGCGC 
TTGTAGAAAT TCTTTCGACA GTTTTGTTCA TCTCTCTCGA CT

AT3G09600.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.3); Has 1480 Blast hits to 1470 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 6; Plants - 1120; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09600.2

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR