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GT23175

CSHL Arabidopsis genetrap mutant lines

Original: GT23175

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23175

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 172910 [Map]; Strand: w
      • AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23175 - 5-prime edge 
    ACACTGCTTA CATGAAGATG CTTTTCGCTG ATGGGAGGGT GGAAGAAGCC 
    ACGGAGGTGT ATAAGGAGAT GTTACGGTCG CGGGTTTCTC CGAATTGTCA 
    CACTTATACT GTATTGATGG AGTATCTTGT CGCCACAGGT CAACTTCATT 
    CTCTTGCACA CTAAGTGTTT GTTAAAATGC TTAGCTGAAA ATCCAAAACT 
    TTTGCTTTAT GTAGATGATT CTGGTATCTG AATGTTTTGT AGCCTTGTTG 
    ATGATGATGT GTTAGTTTCT TCGTTTGATT TTGCAGGAAA ATGTGAGGAA 
    GCCTTGGACA TATTCTTTAA AATGCAAGAA ATTGGTGTGC AGCCAGATAA 
    AGCAGCTTGC AATATTCTGA TAGCGAAAGC CTTGAAATTT GGGGAAACAT 
    CTTTCATGAC TCGAGTTCTT GTGTACATGA AAGAAAATGG AGTTGTCCTA 
    CGCTATCCTA TCTTTGTTGA AGCTTTAGAG ACACTGAAAG CTGCAGGCGA 
    AAGTGATGAT CTGTTAAGGG AAGTCAACTC GCATATTT

AT2G01390.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR