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GT23205

CSHL Arabidopsis genetrap mutant lines

Original: GT23205

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23205

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29937771 [Map]; Strand: c
      • AT1G79570.1 - [+] show detail - Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
        Distance: 0; Region: intron2 (5UTR)
    Flanking Genome Sequence: GT23205 - 5-prime edge 
    TTGGGTTAGT TTGAAATCCA ATTCTCGCTG AGAATTTTAT GCTCACGATC 
    ATTCACATAA GAGATTCCGC TATCTGAAGA AATCGAAGCA TGTGAAATTT 
    TCCCTTTTCC TTTCGATGTC TGCGTTTCGC TGCGTTGTCA TCTTTTGTTC 
    ATCTCACTCG ACTAAATACT AATATCCGTA AACATTACAT TGATGATTAG 
    TATTTTAACT ACTCTCTCTG CTTATTTCTC TAACTTAATC TCACAGAGAG 
    ATATCCGAAG CTTCTTTTGC TTGGAGTCAA ATTGAAGTGT GGGAAACAAA 
    GTTGGCAAAC TGGTGAAGCA ATGGCTTTAC ACTTGAAATG AAAATACAAA 
    AAAAAAAACC AAAAAAATTT TTGGGAAAAC ATTAAAAAA

AT1G79570.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Computational Description
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 118967 Blast hits to 117429 proteins in 4809 species: Archae - 112; Bacteria - 12197; Metazoa - 45923; Fungi - 10276; Plants - 32353; Viruses - 463; Other Eukaryotes - 17643 (source: NCBI BLink).
Link
InterPro Scan - TAIR