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GT23269

CSHL Arabidopsis genetrap mutant lines

Original: GT23269

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23269

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3108609 [Map]; Strand: c
      • AT3G10080.1 - [+] show detail - RmlC-like cupins superfamily protein
        Distance: -432; Region: promoter
    Flanking Genome Sequence: GT23269 - 5-prime edge 
    TCCCTTGCTA TCATGCCTTG GGAGAAACAA AAAGCTTAAG CAACAAATTC 
    ATCATTTTGA ATATCATGGC ATGCGCACAC AGCACGCCTT ATACGGGCCC 
    CTGCTTCAGC CCAAGACATA GATTTGGTTA TGCCTATACC AAAATTACAT 
    TATAAACCGG GATTGACACT AGGATCCGAA ACCTTGGACT CCAGTTATAT 
    TTCCATTTTT ATGCACAATT GTATTAATTT GTAACTATGA ATTACATAGA 
    CGAATAGTAA ATTCATAAGA GATGTGTCAA TCAAGCCACA AAAGGGGTTT 
    ATCAGTCAAT GTACCGGCCT AACCACTCCC ATAACCAAAA CCACATATCC 
    AAACGTGGTT TTTCATTTGG TACAAAAACC CACACCTTAA TTTCACAGAC 
    GAAATTTTGG TTGATAAAAA GTAACCATCT TAACCAGTCT CTCATTTACC 
    CCCACCAGAT ATACATATGC TTATTTAAAC CGGATGTAAC ACAACTCT

AT3G10080.1

Model type
Protein coding
Short Description
RmlC-like cupins superfamily protein
Computational Description
RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT1G18980.1); Has 1595 Blast hits to 1591 proteins in 125 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 57; Plants - 1448; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR