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GT23315

CSHL Arabidopsis genetrap mutant lines

Original: GT23315

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23315

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1508418 [Map]; Strand: c
      • AT4G03415.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -1918; Region: intergenic
      • AT4G03420.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -3421; Region: intergenic
    Flanking Genome Sequence: GT23315 - 5-prime edge 
    TGTGACACCC GAATTAGATT TAGCAAACTC AATTTATATA TGTATGTAAT 
    AATTTTACAA TAATCCGGAT AATATATCAG AATTTAAATC TATATAACAA 
    TCACCAAAAT AAATTAAATT ACACTGACAA TATGAATAAA TTCAAAAAAG 
    TACATGCTAT TGTACTACAA TCTATTGTCG GCAGTACATA ATAAATCTTA 
    ACGTTTGTTC TATGGGATTT TGTGTTTTGT AAAAGCCAAA AGAACCTTAC 
    AAGACTTTTG CAAATAATAA TATGGATACA TTTGAATCTC AATCGTTAAA 
    CAATTTGTAA GCTTTAATTC AAAAAACAAC AGAAAAGAGT TTAACAAAAC 
    AAAACATATG AAAGGAAAAA GAGAAATGGA TTTGGATGTG AAGAAAAAAG 
    TGGAAGAAAC ATATTGGCTT TGTACTTTAA CAAAAAGAAA AAACATATTG 
    GCTTTGGTTC CAAATAGTGA TTGCGTTTTG CGGTACGGGA AAAGTGCGGT 
    GCGGTTCAAA TAATAACGAA AATACATAGA TACATATGTA TATATAGAGA 
    TTTTGATACT TTTACAACAC AGTTGCGATG CGATTTTGGG TATGGTTTTG 
    GTTACCATTC ATAACCTTTG TAGTAGTGGC TATATAAATC TAATCTTGAT 
    CGTTGTGTTG CTTTAATTAG GAAACACAAG GGAGGGAAGA TATAAAAATA 
    TATCTAAAAG GTTATTTGAT TGATATCTAC ATATG

AT4G03415.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G03590.1); Has 5680 Blast hits to 5679 proteins in 294 species: Archae - 0; Bacteria - 6; Metazoa - 1360; Fungi - 695; Plants - 2466; Viruses - 5; Other Eukaryotes - 1148 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03420.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR