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GT23333

CSHL Arabidopsis genetrap mutant lines

Original: GT23333

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23333

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1974358 [Map]; Strand: w
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT23333 - 5-prime edge
    ACCTTCTAAG CCAACCACAA TGCGGCAGTG AAGGGACTCC CTTTGAGAAA 
    TGGAAAATTA GCATTTGAAA GAGAAAGTTC CATAGTTGCA TCATCGTTGG
    AACTCTTTTC CGAAATGATT CTACCGGTCT GTTTGTTGCA GAGAGGAAGT
    TCATCAACTA CAATGGTTGC CAAGAGACTT TTCAACAATC CATCGAGATG
    ACATACAAGA GAAAAGATAT GTGAGTTCTG TTACCTAAAT GATTTTTCAA
    TGATCCATGA TATTGGCATC GCTCTTCGTT TCCCCAACCT AGCTTCTCTG
    TCCATGTATT TTGCACTATC GATGGTTTAG AAAAGTTCAC ATTGTAACGC
    AAGATTATTG GCCGACGAGT TTCTCCTGAT AATCCCGAGC CAACGAGCTG
    AATCTGGAAG CTACTAGAAT GTTCATCAGG AATACCAACC AAAGTTATTG
    AAGAATCTTC AATTAAACCA CAAGGAAGCT CAAGAAGTAC ATGACTTAAA
    CCAGACAAAT CCTTATCAAA TGCAGTGACA AAATCCGGAC AGATTCTTCT
    AATTTCCTTA GAGACCATAC CAGAAGAATA AGCTCTCTTC TCTCTATTGA
    TTTCTAAAAC CAAACCTTTC ATTGCCAATG TAGCTTCTTC TCTCTCTTGA
    GCAGTTTCTG GCAAAGCATC TGGCCTTTCA AGAAATGGAC GCATTCGAGA
    CCATACAAGC ATTCCATTGG ACACTTCTTC

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06440.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR