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GT23334

CSHL Arabidopsis genetrap mutant lines

Original: GT23334

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23334

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1974364 [Map]; Strand: w
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT23334 - 5-prime edge
    TAAGCCAAAC CACAATGCAG GCAGTGAAGG GACTCCCTTA TGAGAAATGG 
    AAAATTAGCA TTTGAAAGAG AAAGTTCCAT AGTTGCATCA TCGTTGGAAC
    TCTTTTCCGA AATGATTCTA CCGGTCTGTT TGTTGCAGAG AGGAAGTTCA
    TCAACTACAA TGGTTGCCAA GAGACTTTTC AACAATCCAT CGAGATGACA
    TACAAGAGAA AAGATATGTG AGTTCTGTTA CCTAAATGAT TTTTCAATGA
    TCCATGATAT TGGCATCGCT CTTCGTTTCC CCAACCTAGC TTCTCTGTCC
    ATGTATTTTG CACTATCGAT GGTTTAGAAA AGTTCACATT GTAACGCAAG
    ATTATTGGCC GACGAGTTTC TCCTGATAAT CCCGAGCCAA CGAGCTGAAT
    CTGGAAGCTA CTAGAATGTT CATCAGGAAT ACCAACCAAA GTTATTGAAG
    AATCTTCAAT TAAACCACAA GGAAGCTCAA GAAGTACATG ACTTAAACCA
    GACAAATCCT TATCAAATGC AGTGACAAAA TCCGGACAGA TTCTTCTAAT
    TTCCTTAGAG ACCATACCAG AAGAATAAGC TCTCTTCTCT CTATTGATTT
    CTAAAACCAA ACCTTTCATT GCCAATGTAG CTTCTTCTAT CCCTTGAGCA
    GTTTCTGGCA AAGCATCTGG CCTTTCAAGA AATGGACGCA TTCGAGACCA
    TACAAGCATT CCATTGGACA CTTCATCTCA CTCGA

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06440.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR